Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs1677628 | chr5:79961781 | C/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677629 | chr5:79961841 | C/G | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677633 | chr5:79928224 | C/A | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
| KIRP | rs1677634 | chr5:79928324 | C/T | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
| KIRP | rs1677635 | chr5:79962168 | T/G | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677636 | chr5:79926126 | C/T | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
| KIRP | rs1677638 | chr5:79962545 | A/G | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677639 | chr5:79962548 | G/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677640 | chr5:79962864 | T/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677641 | chr5:79962919 | A/T | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677642 | chr5:79963318 | C/T | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677643 | chr5:79963940 | C/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677644 | chr5:79963976 | A/C | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677645 | chr5:79964419 | T/C | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1677647 | chr5:79964816 | C/T | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |